EST details — SGN-C179680

Search information 
Request: 179680Match: SGN-C179680
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C179680Clone name: TUS-32-G6
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179680 is on microarray TOM1 spot ID 1-1-3.3.1.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80196 [cLET-11-I18] Trace: SGN-T105314 EST: SGN-E292851 Direction: 5' Facility: TIGR
Clone: SGN-C179680 [TUS-32-G6] Trace: SGN-T185906 EST: SGN-E372411 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E372412Length: 738 bp (928 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372412 [] (trimmed) CCTAGGAATAACATGAATCAGCAAGGAGATGTTTTTTCTGCTGTTACTCAGGGATTTGGTAGGTTATCTATGATAGCTGCAACGGCAGCACAGTC
AGCTGCAAGTGTGGTTCAAGTGGGGACAAAGGAGTTGACTTCTAAGGTAAAAGAAGGTGGATATGATACCAAGGTTAATGAAACTGTCAACGTTG
TCACAGCAAAAACAAGTGAGATTGGACAAAAGAGTTGGGGTATCATGAAAGGAGTCTTGGCCATGGCTTCACAGAAGGTAGAGGAATATACCAAG
GAAAGTCCAGCCTGGAAGAATGATAGCTGGCAACGAGGTGAAAGTGAAAAGAATGGCTATTATCAAGACTTTAATCAGGATCCTAAAGGATGGAA
TGCTTCTGGAGGAGCCCAGTCTTCTGGAAGGAACGTTAATTCTGTCAGCTCTGGGTCGTGGGATGATTGGGACAATGAAGACAAAAGCAAAGTAA
ATCCTCCAAAGGCGGCAGCAGCACCCAACAACAAGAACGATGACTGGGCTGGATGGGATGATGGTCAGGATGATGGATTCGACAATCACTACCAG
AGTGCATCCAACAATAATCATGCTGCTGTTCATGCTGGAAAATCAGATTCCAAATGGACCGATGGAGGTTTCCTCTGACGGCAGTAAATGTTATA
ACTTCCTTAGTTATTTTTTCCTTCAAGATTCAATTTTCTCCCTTGTCTATTGGGAAAAAAAGGAATTGTCTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372412] SGN-U578392 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185907 [Download][View] Facility Assigned ID: FA0AAD20BD03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0013 Quality Trim Threshold: 14.5