EST details — SGN-C181287

Search information 
Request: 181287Match: SGN-C181287
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C181287Clone name: TUS-36-J5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181287 is on microarray TOM1 spot ID 1-1-4.2.15.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C22440 [cLED-38-D7] Trace: SGN-T58339 EST: SGN-E244727 Direction: 5' Facility: TIGR
Clone: SGN-C181287 [TUS-36-J5] Trace: SGN-T194010 EST: SGN-E392684 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E392685Length: 536 bp (840 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E392685 [] (trimmed) GTTTAATCAACAATTAATTTAGTGAAGAAAATATTATTTTATTAATATGGCTGAAGAGAAACAACATCACCGTTTGTTCCACCACAAGAACAGAG
AGGAAGAAGGTGGTCCAGTTGATCATAAAAAAAAAGTGAAGCACCATAGCCATCTCCAGAAAATTGGTGAACTTGGTGCTGTTGCTGCCGGTGCT
TACGCCTTGCATGAGAAGCACAAGGCAAAGAAAGACCCTGATAATGCACACAAACACAAGATAAAACAAGAGATAGCAGCAGTAGCTGCAGTTGG
TGCTGGTGGATTTGCATTCCATGAACATCATCAGAAGAAAGAAGCCAAGAAAGAGAAAAAGGCAGCTGAGAAAGGACGACACCACTAATTAAATT
TAAGTCACCCATCTATGGACTGCATAAAATAAATAAAAGTTACTATATATGTATATATATTATGTGTTTTATGTTCAGTTTAAATTTAATTTATG
TCCAGTGTGTATTAGAATGGTGTTTCTCACCTTGTAACACTTTTTCTATAATTCTATTCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E392685] SGN-U577352 Tomato 200607 Build 2 11 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194011 [Download][View] Facility Assigned ID: FA0AAD24CE03RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.932 Expected Error Rate: 0.0041 Quality Trim Threshold: 12.5