EST details — SGN-C181917

Search information 
Request: 181917Match: SGN-C181917
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C181917Clone name: TUS-38-D11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C181917 is on microarray TOM1 spot ID 1-1-6.4.10.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C84764 [cLET-2-D18] Trace: SGN-T102795 EST: SGN-E291254 Direction: 5' Facility: TIGR
Clone: SGN-C181917 [TUS-38-D11] Trace: SGN-T194440 EST: SGN-E393114 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E393115Length: 241 bp (941 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E393115 [] (trimmed) GTTCGTCGGAAGCTCACCTTTCTAGAGAGCGCACATTGATAAGGTATATCTTTTTTAAAGCACAAGAATGGAAGGCACTGTCTTTGCCCCTGCTT
TAAAAGGAATCAAGCATGTCAAGTCTGAGGAAGGAGTAATGCTTACCACACCTTTCTTAAATGTCTGCAAACACATCTTACCTATTATAGAAAAG
TTTGGAGCTGCCATGGCACTGGTCAAGTCCGACATTGATGTACATCTAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393115] SGN-U567110 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194441 [Download][View] Facility Assigned ID: FA0AAD26CB06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0091 Quality Trim Threshold: 14.5