EST details — SGN-C182125

Search information 
Request: 182125Match: SGN-C182125
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C182125Clone name: TUS-38-M3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182125 is on microarray TOM1 spot ID 1-1-6.1.10.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C5561 [cLEC-32-E6] Trace: SGN-T29960 EST: SGN-E207747 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E393219Length: 315 bp (863 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E393219 [] (trimmed) AGGAGTCGAAACCGGTTCAGATCCCTGGGAGAGTTACACCGGTGGTAGACGGCGGAATCGTGATGGGTCAGGTAATGATTTTGAGAAGGGGAGAG
TCGTTGGATTCTCTGAACCCTAATATCAGGAAAGAGAACAAAACAACGTCGTCGGGTAAGAAGAAGAAACAACCGGCGAGTGGTAGCGGTGATGA
ATTGACGACAGTTTACGGTACCGGAAGATTAGGTCCGGAACAACCCGGAATGTTCCCGAAAAATATCCGGGTCGGGCATACCCCGACCGACGTTT
ATGCCGGATCTGCTTTCTCTTATTCTCCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393219] SGN-U579174 Tomato 200607 Build 2 106 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194545 [Download][View] Facility Assigned ID: FA0AAD26AG02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0025 Quality Trim Threshold: 14.5