EST details — SGN-C182252

Search information 
Request: 182252Match: SGN-C182252
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C182252Clone name: TUS-39-B10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182252 is on microarray TOM1 spot ID 1-1-7.2.8.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C125569 [cTOC-1-F8] Trace: SGN-T136209 EST: SGN-E325471 Direction: 5' Facility: TIGR
Clone: SGN-C182252 [TUS-39-B10] Trace: SGN-T191750 EST: SGN-E390424 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390200Length: 734 bp (864 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390200 [] (trimmed) CTCGAATGGCAATGACAAGAAGAATTCAGCCACTTGTCTCTTTGAACCCTTACCAAGGAAATTGGACCATTAAGGTTCGAGTAACTAGCAAGGGT
AATATGCGAACCTACAAGAATGCTCGTGGAGAAGGCTGTGTGTTCAATGTTGAATTGACTGATGAGGATGGTACCCAAATACAAGCTACAATGTT
TAATGAAGCTGCAAAGAAGTTTTTTGACAAGTTTGAATTGGGGAAAGTATATTACATTTCAAAGGGAACTCTTCGAGTTGCCAACAAGCAATTCA
AAACTGTACAAAATGATTATGAGATGACTTTGAATGAAAATTCCCAAGTTGAGGAGGCTAGCAATGAAGAAGCTTTTATTCCAGAGATAAAGTTT
AACTTTGTCCCAATTGATGAATTGGGCCCTTATGTCAATGGCAGGGAGCTTGTTGATGTTATTGGGGTGGTCCAAAGTGTATCTCCAACAATGAG
CATACGGAGGAAGAGTAACAATGAGACAGTCCCAAAGCGTGATATAACTATTGCAGATGAGACGAAGAAGACTGTTGTTGTTTCTCTTTGGAATG
ATCTTGCCACCCATGTTGGACAAGAACTGCTAGACATGGCTGATAGATCTCCTGTAGTTGCAATCAAATCCCTTAAAGTTGGAGACTTCCAAGGA
TTGTCTTTATCAGCATTAAGCAAAAGCCATATTGTTGTGAATCCTGATTTACCCGAAGCCAAAAAATTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390200] SGN-U569920 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191526 [Download][View] Facility Assigned ID: FA0AAD27DA05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0076 Quality Trim Threshold: 14.5