EST details — SGN-C182492

Search information 
Request: 182492Match: SGN-C182492
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C182492Clone name: TUS-39-L10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182492 is on microarray TOM1 spot ID 1-1-7.4.8.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C90168 [cLEW-1-O4] Trace: SGN-T112111 EST: SGN-E299881 Direction: 5' Facility: TIGR
Clone: SGN-C182492 [TUS-39-L10] Trace: SGN-T191771 EST: SGN-E390445 Direction: 3' Facility: INRA
Clone: SGN-C182492 [TUS-39-L10] Trace: SGN-T197484 EST: SGN-E396158 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E378606Length: 2010 bp (untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E378606 [] (untrimmed)
CCGGGCTAGGGNAAAAGNNNNNNCCCCTNACCCNCCAAGTNTGGNNNTTAGGTACCCTCCAGAATATAGAATAGAAAGANNAAGAGAGGAAGGNA
GGAAAAGTAGAAAACAAANCCTNTNNNNNGGAACCAGCCNNCAGNGNAGGGAGGNNNNNNNNNNNNCCACNCNNAANCCANACCAACACCGNCGC
GACTCCTCCTCACAGAANGGGAANGGGAGAGGGGAGAAGAAAAGAAGAAGAGAANGGAAAGAGGAAGCATGAGGGAGGAAGGAGNAAGGGGAGCG
AAAAGGAGATGGGGAAAGGAGGAGAGAGAACGGGGAGAACAGCGGAGGGAGGAGAGACGAGGGGAGAGCAGCGGCAGCGTCAGACGCCCAACGCG
GCGACACAGACAAGCACCAGAAAGAGCAGACGGACACGACAGGCAGCGAGCCGACAAGCGGCCCGCGAACACAGCGCCGCACAACACCAAGGCCG
GCGAGCGAGAGATAGGCGGCGGCGACACAGCACCGCCGAGCACGCAGCGAGGTCAGACGCAGGGAGACGCGCGGCACGCAGCGCGACAAGGACAG
ACGAGCCAGGAACACGCCGGCCCGGCGCAGCGCGCGGCGACGCAGCGGCCGAAGCGGGCCGCGCCACACCAGCCGCAGCACAGGAGACGCGCGCG
CCAGGCGAGAGGGCAGCAAGCCAACCGAGAGCCAAGACGAGAAGGTAGAGAACGACGTGCGAGAGAGCACAGGAAGCACAGAGAGGCGCACAAGC
GGCGACAGCGGGAGAAGGCCGGCACCGAGGAGGCGCCGAACACCCGACCAGCAGACCGAAGCAAGCACGCCAGAGCGAGCGGACGCGCGACGACG
ACAAAGCAAGGCAGGCGGACGGACAGAGGAGCGCGCGGGCAGACGCCAGGACACGAGGGCGGGAGGGCAGCGACGAGAGAGGGGCAGAGACCGAC
CGAAGGTGACCACCGCCGAACGCCGCAGACGGACCCACGGAACACGCGAGAAAGGCAGGAGGGACGACATGAAAAAACAACGGACGGGGACAGAA
CCAGGGACACAGGCACTACGCGAGTCGCGCAACCGGCGACAGAAACGCGCGGCACACAAGGAGCAAAGAGGGAGAGGGGAGGGGCGGCACNAGCA
CAACCACGAACACAAACGGACCGGAGAGCAGCACGGCGGACAGCGGAGCGCGGACAGCGGGCGCGGTGAAGCGCCGAGCGCAGCGGCCCGTCGAG
CGGCCCAGGCAAGCAAGAAGAACAGCAGCCCAGGGACGCCGCACGCAAGCAAACGCGGCGAGCAACGCACGCGTGCCAGGCGCGCGACGCCCGAG
ACACAAGGGCCAGAGCAGAAGAAGCGGGGATAAGGAGCGCAGGAGCGGGACGGCAACCACAGCAGCCGCGGCGGCGCAAGCACCGGGCGCGCACA
GCCACGCACGTGAGGCGAGGCGCGCCGGCACACACAAGCCGAGGAAGCCGCGCACGGAGACGGACCGCGCAGCCACGAGCGCAGCCCGTACACAG
AGGATCAGAAGGCGCAGCGGAGCAGCCGCAGACGGGGGACCAGAGAGAGAGGCAGAAACCGGAGCCGGCACGGCGCGCACGACGAGGAGGGCCGC
GGGGCGCGACGAGCGCCAGAGACCGGCCGTGCGGGCGGCGGAAGCGACCCAGCAGCGCGCCGCGACCCACAGACACCACGAAGAGGCGCGGCAGG
GCGCCAGCCCCCCGGCGCCGCCCGGACCCCGGCGCCAGGCGACGCGCGGGGCGGGAGCGACGCGCGACGCGCCACCACACGAGCAGACGAAGGCG
GAGCGAAGCGGAGAGAGGAACGAAGTACGCACGCGCGCGCCCGCCAGACGGCGCCGGAGACCGATCACGAGATCATCCAGCCCGGCGCAGACGTC
ACAGAACGGGAACCGCCAAGCACGCACACGGCCACCGGCGCCCAAGAACCGAGCGCGCGACGCCGAGGCGACCCGCCCAGGACCCCGACACCGGG
CGCCGGANAGCAAGN
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T1726 [Download][View] Facility Assigned ID: TUS39L10.ab1
Submitter: Koni Sequencing Facility: Giov. Lab
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Problems: High expected error (low overall quality)
Sequence Entropy: 0.000 Expected Error Rate: 1.0000 Quality Trim Threshold: 20.5