EST details — SGN-C182622

Search information 
Request: 182622Match: SGN-C182622
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C182622Clone name: TUS-40-A20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182622 is on microarray TOM1 spot ID 1-1-5.1.5.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C118160 [cTOB-12-E4] Trace: SGN-T131609 EST: SGN-E319742 Direction: 5' Facility: TIGR
Clone: SGN-C182622 [TUS-40-A20] Trace: SGN-T187913 EST: SGN-E376019 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376020Length: 652 bp (884 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376020 [] (trimmed) GTTCGCCCTTCTTCCATTCTTTCTGCGGCGAATTCTTATTGTCTTCCGGAAACTCTCTCTATCTCCATGAGGTAGGGGATAAGAGAGTGGACGTG
TAGAAAAGATCTCCACAAAGACGAAATGGGTCATACTAAGGAGCAATTGCTTGTCCGTTTACAGGAGCTTCAAATTGATTTCACCAAACATGAAC
ACCCAGTTGTTTTGACAGTTGAAGCACAGGCAAAGCATGTTGGGCATCTGAATGGGGCATTGAGTAAAAACCTATTCTTGAAGGATAAGAAACAC
AGGTTCTATGTTGTTTCTGCAATGGCAAAAACCAATGTAGATTTGAAAGTTTTGTCTCAGAGGCTTGGTTTGGGAAAAGGAGGGTTAAGAATGGC
TCCTGAAGAAGCACTTGGAGAAGTACTTCAGGTGCCGCTTGGCTGTGTCACCCCTTTTGCACTTGTAAATGAATCAGCAAGGTGTGTTTCCTTGT
TATTGGATCAGGGATTTAAAACACAGGAATGCTGCTTCTTCCACCCACTCTCAAATGATACAACAATTGCTCTTAATGCTCGTGGTCTCGATAAG
TTTCTGAGTTCCATAGGAAAACAATCAGTCTATGTGGACCTTGAGGCTAATCCTCCAGTAGGAAAGGATCAACCTNCTGATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376020] SGN-U585313 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T187914 [Download][View] Facility Assigned ID: FA0AAD28BA10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0094 Quality Trim Threshold: 14.5