EST details — SGN-C182889

Search information 
Request: 182889Match: SGN-C182889
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C182889Clone name: TUS-40-L23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182889 is on microarray TOM1 spot ID 1-1-2.4.5.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C133001 [cTOD-4-H21] Trace: SGN-T142449 EST: SGN-E330284 Direction: 5' Facility: TIGR
Clone: SGN-C182889 [TUS-40-L23] Trace: SGN-T195447 EST: SGN-E394121 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E394122Length: 573 bp (815 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E394122 [] (trimmed) TCCCTTCACAAATCCAACTCCACGCGCCGTTCTGTATCAGTCACTAAATCACACGCGCCGTCGTCGTTGCTAGCTGAAGCCCCAGATGAAACGGT
TGTTTCCGGCGATGAAATAACCAACGCGCCACCGGAGGAAGGACCCATTGAGCTCCCATCTTCAATAACGGATGTTTTTGCTACTTCTGATGACC
CTTCGCCGCTTCAAACCGCCACCAGTCTTCTCCTCACCGGAGCTATATCGGTTTTCCTCTTCCGCTCCCTCCGCCGCCGCGCTAAACGAGCCAAA
GAACTGAAACTTAGGTCAACGGGGGCGAAGAAAACGTTGAAGGAGGAGGCAGTGGAGAGTTTGAAAGCTATTACGCCAACGCCAATCGATGCCAA
GACTCCACCTTCACCTGCTCAGGCACTCTTGGGAGGTTTAACAGCTGGTGTTATTGCACTTCTCCTTTACAAGTTCACCACTACCATCGAAGCTT
CTCTGAACCGCCAAGCACTTTCAGATAGTTTCTCGGTTTGCATCTCATTTGCCTTTACATTTGCTGTTTCATTTCTTCCCCTGTGATCTGTATAA
TGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394122] SGN-U566283 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195448 [Download][View] Facility Assigned ID: FA0AAD28CF12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.987 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5