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EST details — SGN-C183049

Search information 
Request: 183049Match: SGN-C183049
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C183049Clone name: TUS-41-C15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183049 is on microarray TOM1 spot ID 1-1-2.3.3.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15359 [cLED-11-L15] Trace: SGN-T51544 EST: SGN-E235534 Direction: 5' Facility: TIGR
Clone: SGN-C183049 [TUS-41-C15] Trace: SGN-T191689 EST: SGN-E390363 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390145Length: 509 bp (877 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390145 [] (trimmed) GGCAAGGAAATGTGGTGCCGAGGAATTGTGGTTCTCACTCATGCTCAGCTTTCCCCTCCTGATGGATTGACTTATGAAGAATTCACGTCCCGAAG
ATCAGAGGCACTTTTGAAAATCGTCCGGATGGGTGCTCGAATCAGGAAACAAGACATTCAGGCTGCTTCAATTCCTGTTGTCTTGGTTGAGAATA
GTGGCAGATGTAACAAGAATGAAAGTGACGAAAAGATTCTTCCAAGTGGAATTGCGTGGATACCCAATTTAGTCCAAACTATTACAGATGCTGTT
TTAAGTGGAAGCAAGGGTATTTTGGTTGATCAAAAACTGATTGAAGGTCCTAATCCAAACAATAGGGGCAAAGTGCTAATTCCTTTTATACTAGC
ATTCCAGTATTTCTTTGTAGTGAAAAGGATCCAGAGGTCCATTAAGAATGATATTGCACGGGAGACCAAGCCTTCATGGGCATAAACATTCATTG
GAATGGCTCTTGTTTGTCAACTTAATTCCCCTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390145] SGN-U581266 Tomato 200607 Build 2 56 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191471 [Download][View] Facility Assigned ID: FA0AAD29AB08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5