EST details — SGN-C183091

Search information 
Request: 183091Match: SGN-C183091
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C183091Clone name: TUS-41-E9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183091 is on microarray TOM1 spot ID 1-1-8.1.3.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C27147 [cLEF-42-L1] Trace: SGN-T60634 EST: SGN-E247590 Direction: 5' Facility: TIGR
Clone: SGN-C183091 [TUS-41-E9] Trace: SGN-T191694 EST: SGN-E390368 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390153Length: 579 bp (903 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390153 [] (trimmed) CACTTCTTATCTTATTCTTCCTTTTGTGATTAAGGACTTATTGTCTAACGAGTTGAAGTCTCAACCAAAAGCCCCAAGTCTGACAAGCAATATGT
CTGGGTCGGAGAGGCCAATTCTAGCACATATACCATTCGAGAGGAGACTGATCCTGCAAAACAACTTCCTAGGGGAACCCGTCTCACTCTATATC
TTAAGAGGGATGACAAAGGATATGCACATCCGGAAAGAGTAAAAAAGCTTGTGAAAAACTATTCACAGTTTGTTTCATTCCCTATTTACACATGG
CAAGAGAAGGGATTTACAAAAGAGGTTGAAGTTGACGAAAATCCATCAAAAGCCAAGAAGGAAGGAGAAGATGAGACAGCTGAGAAAAAGAAAAA
AACTAAAAAAGTTGTGGAGAAATATTGGGACTGGGAGCTTACAAATGAGACTCAGCCAATATGGCTTCGAAGCCCTAAGGAAGTGAGTAAAGAGG
ATTATAATGAGTTCTACAAAAAGACTTTTAATGAATATCTGGAGCCTCTTGCTTCTTCACACTTCACAACCAAGGGAAAAGTAAAGTTCCGGTCT
GTACTTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390153] SGN-U584034 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191479 [Download][View] Facility Assigned ID: FA0AAD29AC05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.947 Expected Error Rate: 0.0074 Quality Trim Threshold: 14.5