EST details — SGN-C183145

Search information 
Request: 183145Match: SGN-C183145
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C183145Clone name: TUS-41-G15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183145 is on microarray TOM1 spot ID 1-1-2.3.3.9 [Order] [Tomato Microarray Database]
See unigene SGN-U565692 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C64197 [cLEM-5-G23] Trace: SGN-T85161 EST: SGN-E271356 Direction: 5' Facility: TIGR
Clone: SGN-C183145 [TUS-41-G15] Trace: SGN-T191701 EST: SGN-E390375 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390164Length: 611 bp (883 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390164 [] (trimmed) GCAGCAATTCAGAAACTCAGAAGCCAAGAAGGAAATCACAATGAAGACACCGACGATGCAGCTGAAACGCCGTCAACTCCAAAAACACCAATAGA
GCTGGCGATTGATTTCATTCTTCATGATTTTGAAATGGCAGAAGTTGAGCCAATATCAACCTATGTAGATTTTGGTGAAAGAGAATTTCTGGTTG
CTGATGAAAGAGGATATGAACATTTGCTTTATAAAATGGCAGAAAATTTTCTTTTCACCTGTGAGGGTAAAATTATGGACAGTCGACTCAAGCTC
AATACGGTTGTTCGGGAAGTGCAGCACTCGAGAAACGGCGTCTTGGTGACAACAGAAGATGGTTCCCTTTACGAAGCCAATTATGTCATTTTGTC
TGTTAGCATTGGCGTTCTCCAAAGCGACCTCATTTCATTCTCACCCTCTTTACCGAGATGGAAGATGGAAGCCGTCAGAAACTTGGACGTGATGG
TTTATACAAAGATCTTTCTCAAGTTCCCTAACAAGTTCTGGCCTTGTGAACCTGAAAAGGAGTTCTTCATCTATGCTCACGAGCGAAGAGGCTAC
TATACGTTCTGGCAGCACATGGAAAATGCTTATCCGGGATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390164] SGN-U565692 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191490 [Download][View] Facility Assigned ID: FA0AAD29AD08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0041 Quality Trim Threshold: 14.5