EST details — SGN-C183476

Search information 
Request: 183476Match: SGN-C183476
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C183476Clone name: TUS-42-E10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183476 is on microarray TOM1 spot ID 1-1-7.1.1.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C83305 [cLET-24-C11] Trace: SGN-T108579 EST: SGN-E296062 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E394804Length: 524 bp (881 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E394804 [] (trimmed) AAAGTTGGTAAAGTTAAGAAAAGATTATTTTTCAGTAAAATAAAATAAAAATAGAGAGAAGATATATAGATGAAATTGAGGACAATTTATAAAGG
ATCATCACTTATCCATCTTTTGAACATAACAAAACATTCTTCAGGCTTGTCCATACAAGCTGTGTGTCCTGCTCCCTTCACTGTTGCATAAGTCA
TTTTGTTGGAGTAAGATCTCGTATAGCCAGCAACTTGATTGTTTACGTTCCATTGGCGCCAATCATCATCAATAGAGTAGTTTAGAGACTTTATC
CATGTTTGTGTATCTTGAAAAGGTACCATATAATCATGATCTCCACTGTATATAAGTGATCGATAGCCTTTAGTGCTTAAATTTGCATGATATGG
TACAACATTATGTACCGTCAAAGTGTAGTTATGATGAGAGCCTTCACTTATATCTCTTCTACATTTTATCCAACTTTCTATGGGCGGGGGGGGAA
CATGAAGAGCTTTCTTGGACTTGAGGGTCATTATCCCAATACCTCAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394804] SGN-U583067 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T196130 [Download][View] Facility Assigned ID: FA0AAD30BC05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.947 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5