EST details — SGN-C183522
| Search information |
| Request: 183522 | Match: SGN-C183522 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C183522 | Clone name: TUS-42-G8 |
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| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C183522 is on microarray TOM1 spot ID 1-1-1.3.2.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C74979 [cLES-12-F17] | Trace: SGN-T100171 | EST: SGN-E286640 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C183522 [TUS-42-G8] | Trace: SGN-T195032 | EST: SGN-E393706 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183522 [TUS-42-G8] | Trace: SGN-T196023 | EST: SGN-E394697 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183522 [TUS-42-G8] | Trace: SGN-T196023 | EST: SGN-E399259 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183522 [TUS-42-G8] | Trace: SGN-T200295 | EST: SGN-E399258 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E393707 | Length: 64 bp (978 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E393707 [] (trimmed - flagged)
TAAAATCCATTGCTACCCTAAAAAAGAAATATGGGTTTGAATGGCAAGTTGGTTGTTTCCATGG
| Unigenes |
| Current Unigene builds | |||||
| No current unigene builds incorporate this sequence |
| Chromatogram |
| SGN-ID: SGN-T195033 [Download][View] | Facility Assigned ID: FA0AAD30BD04RM2 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
| Problems: | Possibly chimeric (anomalous insert into vector) |
| Sequence Entropy: 0.870 | Expected Error Rate: 0.0217 | Quality Trim Threshold: 14.5 |
Working
