EST details — SGN-C183553

Search information 
Request: 183553Match: SGN-C183553
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C183553Clone name: TUS-42-H15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183553 is on microarray TOM1 spot ID 1-1-2.4.1.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C34324 [cLEG-30-I19] Trace: SGN-T69179 EST: SGN-E255453 Direction: 5' Facility: TIGR
Clone: SGN-C183553 [TUS-42-H15] Trace: SGN-T196087 EST: SGN-E394761 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E399382Length: 661 bp (920 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E399382 [] (trimmed) TAAATTTCATCAATGGCGTCGTTGGTGAGGAGAAGATTTTATTCGAGTGAAGCATCATTTGTTCAGAGGCTAAGAGATCTGCCAAAGTACCTTCC
TGGTACCAAAATCAAAACTCAAGTTTCTCAACTCATTGGGAAAACACCATTGGTGTATCTAAACAAAGTGAGTGAAGGATGTGGTGCTTATATTG
CTGTTAAACAAGAAATGATGCAACCTACTTCTAGTATCAAAGATAGACCAGCATTTGCTATGATCAATGATGCAGAAAAGAAAGGATTAATCACC
CCTGGAAAAACAACACTAATCGAGCCAACATCAGGGAATATGGGAATAAGTATGGCATTTATGGCTGCCATGAAAGGCTACAAAATGATTTTGAC
AATGCCATCGTATACAAGCTTGGAGAGGAGGGTAACCATGAGAGCATTTGGAGCTGATTTAGTGATCACTGATCCAACTAAAGGAATGGGAGGAA
CTATTAAGAAAGCTTACGATCTTTTGGAATCTACACCTAATGCTTATATGCTTCAACAATTCTCCAATCCTGCCAATACTCAAGTTCATTTTGAG
ACTACTGGCCCTGAAATCTGGGAAGATACTCAAGGTAATGTTGACATCTTTGTCATGGGAATAGGAAGTGGAGGCACAGTCTCTGGTGTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399382] SGN-U570111 Tomato 200607 Build 2 51 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200362 [Download][View] Facility Assigned ID: FA0AAD30CD08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5