EST details — SGN-C183625

Search information 
Request: 183625Match: SGN-C183625
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C183625Clone name: TUS-42-K15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183625 is on microarray TOM1 spot ID 1-1-2.3.1.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14718 [cLEC-8-E2] Trace: SGN-T25163 EST: SGN-E200074 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E393627Length: 728 bp (879 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E393627 [] (trimmed) AAATTCGCACAATTAGTAGAATAAATACAAGATGAAAAGAATTTGTCAAAAGACGATCATCTTCTCTTCTCCTTTGAATTACAATTACAATGAAG
GACAAGAGCGACAAACTTTTCAGTCACAAAGCCGAAGCCTCTTAAGAGTCTCTCACACTACAGTAGATACTCATTACATAACTTAAGCCTAATGC
TTAAAAGAAAAAACTAACAATCCCAATAGGAAGAGGACAATCTTTTGGCCTCTCTCTACTCTTTGGGTTTCTCCATTTATTGTTTTTACGATCTC
AACTTAACACTCATTCATCACCTCATAAACATATTCACAAACAAGATTTGAATGACCGGATATCATACATAACTCATGACGACCCTCTTTCTTTC
ACTCTATATATACAAGGCTAAAACAAATTTGGTTTGGTTTCTCATGTCTCCCCCAAAAACCTCACTTTTTAATATCTTTTTCTTTGTTGTAGTTA
TTTTCATAATGACCTCTGCAATATGATTTACCTAAGCTACAGCAGAGATGCTGCTGCAGCAGTTGAAGCCTTCAATCCTCACAGCAGCTGGCTTA
ATCCCAAACTTCACTGGAACACAGCCGCCTCTATTATTACGACCACAAGTCGAAGTAAAGGAGGGTGGTGGTGCAGGTGCTCCTTCTGGAATTGT
TAGTATAGGAACAAAATTGTCTTTTCAAAATTGGGCATCCTGAATCAAGGGATTCGGAACCCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E393627] SGN-U580974 Tomato 200607 Build 2 19 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T194953 [Download][View] Facility Assigned ID: FA0AAD30AF08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5