EST details — SGN-C184026
| Search information |
| Request: 184026 | Match: SGN-C184026 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C184026 | Clone name: TUS-43-L8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184026 is on microarray TOM1 spot ID 1-1-1.4.19.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C22824 [cLED-3-J17] | Trace: SGN-T49023 | EST: SGN-E228375 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C184026 [TUS-43-L8] | Trace: SGN-T197972 | EST: SGN-E396646 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184026 [TUS-43-L8] | Trace: SGN-T199950 | EST: SGN-E398624 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378628 | Length: 318 bp (1101 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378628 [] (trimmed)
TGTTAAAAAACTAGAAATTATGTCAAGCAGAGCGAAAGCAGATTTTGAGACTGAAGTTCGTCTTATCAGTAATGTCCATCATCGCAATCTCATCC
GTCTCTTGGGATGTTCAAACAAAGCATCAGACCTACTACTTGTTTACGAATACATGGCAAATGGCAGCCTCGAAAGATACTTATATGGAGACAGA
CGAGGGATGCTCAACTGGAAGCAAAGATTCAATATAATCTTTGGCACAGCTCGTGGCCTTGCATACTTGCACGAGCCAATCCCCGTCTGCATCAT
CCATCGAGATATAAAATCCAGCAACATTCTACT
GTCTCTTGGGATGTTCAAACAAAGCATCAGACCTACTACTTGTTTACGAATACATGGCAAATGGCAGCCTCGAAAGATACTTATATGGAGACAGA
CGAGGGATGCTCAACTGGAAGCAAAGATTCAATATAATCTTTGGCACAGCTCGTGGCCTTGCATACTTGCACGAGCCAATCCCCGTCTGCATCAT
CCATCGAGATATAAAATCCAGCAACATTCTACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378628] | SGN-U586568 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1808 [Download][View] | Facility Assigned ID: TUS43L8.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.967 | Expected Error Rate: 0.0070 | Quality Trim Threshold: 20.5 |


