EST details — SGN-C184237

Search information 
Request: 184237Match: SGN-C184237
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C184237Clone name: TUS-44-E3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184237 is on microarray TOM1 spot ID 1-1-6.1.16.2 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24242 [cLED-7-J8] Trace: SGN-T50441 EST: SGN-E231932 Direction: 5' Facility: TIGR
Clone: SGN-C184237 [TUS-44-E3] Trace: SGN-T191875 EST: SGN-E390549 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396266Length: 639 bp (876 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396266 [] (trimmed) GAAAGACAACCATTTATTTTTTTATTTCATAGATAGCATCAACAAAACTAGCAAGGCAGTAATGAGCTATCCAGCTGATACATTTCATTTTAACA
TAACATAAACATAACCAAACCACACACAATTAAACTAATTAAACATAAAATTTGGCACCATAGCCACCAACTCATGAAGGCTTTAACAATCCTCA
AGCTTGATCTCCACACTTTCAATGGATACACCTTCACCACCAACTTTTGGAACCAAAGTTACCGCAATTGTATCTTCATCTTCCAATCCAATATC
CTCCAACAGTTCAGTTATCGCCAGCGTAAAAGTAACATCCTTAACATGATTATCATTATTTCCATGAACATGAGGCAAGCTAGTATAACTCCCCG
CAAACTCCGCCTTATCAAGTTCTTCTGCATTCACAGTCTTGTCCACGTTCAAAAACACATCGAACCTTACATACTTCGTATCATCATATGCCATT
TTATTGAATGTCAGAATCTCCTCCTGCTCATTTTTCTCTTGTGTTGTCCTTGACGAAGCTGGCCGCGTGATCGAGAACGAAATCGCACGGTCCAG
CTTGGCCAGTGGGAACACCTTGCTAACTGGTGCAATTGACGCTGTATTCACTTTTCCTGAAGAAGACCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396266] SGN-U577900 Tomato 200607 Build 2 148 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197592 [Download][View] Facility Assigned ID: FA0AAD32AC02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0045 Quality Trim Threshold: 12.5