EST details — SGN-C184281

Search information 
Request: 184281Match: SGN-C184281
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C184281Clone name: TUS-44-F23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184281 is on microarray TOM1 spot ID 1-1-2.2.16.10 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C73216 [cLER-3-M4] Trace: SGN-T92281 EST: SGN-E277393 Direction: 5' Facility: TIGR
Clone: SGN-C184281 [TUS-44-F23] Trace: SGN-T198281 EST: SGN-E396955 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396956Length: 689 bp (837 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396956 [] (trimmed) TTACACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAATTGAGGCAGACTCAACTTGAGTACCTAACTCCTTTGGTACGAGACAGAAAGGCA
TTTGTGGACAGCAATGGAGATCCTAATAGCAGTGAATCAGAAATGGTAAGTCCAATTGGTGCAGCCTATGTTGATTCATTATTTAGTCTCGAGCC
ACCTGGCAGGAAACTAGGAGAAGCAGAGATTATCACACTTGTTTCAGAAACAATAGGTGCAGGAACTGATACAAGTGCCACAGCACTTGAATGGG
CATTGCTTCACTTAGTAATGAACCAAGAAATCCAAGAAAAACTCTACGAAGAAATAGTTGATTGTGTTGGTAAAAATGGTTCCATTTCAGAAAGT
GATGTTGAAAAATTGCCTTATCTTGGAGCCATTGTGAAGGAGACTTTTAGAAGGCATCCACCTAGCCATTTTGTTTTATCACATTCTGTAACAAA
TGACACACAATTAGGTGGCTACAATATCCCTTCGGATGCTTATGTTGAATTTTACACCGCATGGTTAACGGAGGATCCGAGCCTATGGAAAGACC
CGACCGAGTTTCGACCCGAAAGGTTTTTGACCGGGGACGGAGTTGACGTGGACTTAACCGGAATGAAAGGTGTCAAGATGCTACCTTTCGGGGCC
GGGTCCTCCGATCTGCCCCGCTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396956] SGN-U577985 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198282 [Download][View] Facility Assigned ID: FA0AAD32CC12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0039 Quality Trim Threshold: 14.5