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EST details — SGN-C184399

Search information 
Request: 184399Match: SGN-C184399
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C184399Clone name: TUS-44-K21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184399 is on microarray TOM1 spot ID 1-1-4.3.16.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C15845 [cLED-14-C5] Trace: SGN-T51951 EST: SGN-E233597 Direction: 5' Facility: TIGR
Clone: SGN-C184399 [TUS-44-K21] Trace: SGN-T192136 EST: SGN-E390810 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E396271Length: 640 bp (847 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396271 [] (trimmed) GACAATAATAAATTATTTCTTAATGAAACTTAAAAAGCCATTACATTACATTGGATACATGCATCTTATTATTCATACAATATGAAATTAACTTA
TAACAAGTTAATTCATCAATTATTCCTTACTAAGTAGATTGGTACGACACGATTATTATTTTATTTTTTTTAGGATTTTCAATAATTTAAACTTA
GAACAACAAATTTTTTATTTCTTCACTCACTTACTACAAGGTTAAAAGCCTCATTATAATTATCAAGTTCATATGGATAACCAAGCTTATCAGCT
TGATTTTTGAACTCATCCATCTCAGCTTGAGGAACTTGGAATCCCATCAACAAACTTGCATTTATATCTCCCTGATTACGGTAACGGCATAAAGT
TATATTCCAACGAGGGGAGAAAGCGTCTAAGAATGTTTTTAAAGTTTCAGCCTTCTCAGGTACAATAAATTCACCGAAAATTTCATCACTGATAT
TTGCTGAGCCACCAACCAAATGTTTTAGATGGTCTACAACCAATTCATTATGTGAGAGATTAAGAGTAGTCATATTTGATGATTTCATATCCTCA
ATCCTTTTTTCAAAATCTGATTTCTTTATCACATTACCCCTGGACAAAAATTAGAGCATTTTTCCTTTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396271] SGN-U570558 Tomato 200607 Build 2 227 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197597 [Download][View] Facility Assigned ID: FA0AAD32AF11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.917 Expected Error Rate: 0.0041 Quality Trim Threshold: 14.5