EST details — SGN-C184609
| Search information |
| Request: 184609 | Match: SGN-C184609 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C184609 | Clone name: TUS-45-D15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184609 is on microarray TOM1 spot ID 1-1-2.4.14.11 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C76241 [cLES-17-G18] | Trace: SGN-T101242 | EST: SGN-E288800 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C184609 [TUS-45-D15] | Trace: SGN-T198662 | EST: SGN-E397336 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184609 [TUS-45-D15] | Trace: SGN-T198663 | EST: SGN-E397337 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E378323 | Length: 369 bp (1136 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E378323 [] (trimmed)
CCATCATTGTTCGACCCAATTACCTACATTATGTCAAGAAGTATCAGAGATACGAGAAGAGACACTCCAATATTCCAGCTCACATATCACCATGC
TTCCGTGTGAAAGAGGGAGATCATGTTACTATTGGACAGTGCAGGCCTTTATCCAAAACTGTGAGGTTCAATGTATTGAAGGTGATTCCAGCCGG
TTCTGGTGGTGTTGGGAAAAAAGCTTTTACCGGAATGTGAACTTGAGTGTTTCTATTTTGATGTTACATCTAGAAATGATGTCAGGCATATCTGC
TTTTGCTGATTTTTAGTCTTCATTGATATTCCTTTTTGAGATTCAAATTTTGAAATTTTATGCTAGTAGTAACCAGCTTTTCCT
TTCCGTGTGAAAGAGGGAGATCATGTTACTATTGGACAGTGCAGGCCTTTATCCAAAACTGTGAGGTTCAATGTATTGAAGGTGATTCCAGCCGG
TTCTGGTGGTGTTGGGAAAAAAGCTTTTACCGGAATGTGAACTTGAGTGTTTCTATTTTGATGTTACATCTAGAAATGATGTCAGGCATATCTGC
TTTTGCTGATTTTTAGTCTTCATTGATATTCCTTTTTGAGATTCAAATTTTGAAATTTTATGCTAGTAGTAACCAGCTTTTCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378323] | SGN-U581429 | Tomato 200607 | Build 2 | 81 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1838 [Download][View] | Facility Assigned ID: TUS45D15.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0065 | Quality Trim Threshold: 14.5 |


