EST details — SGN-C185060

Search information 
Request: 185060Match: SGN-C185060
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C185060Clone name: TUS-46-G10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185060 is on microarray TOM1 spot ID 1-1-7.3.12.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C25396 [cLEE-3-I4] Trace: SGN-T58873 EST: SGN-E242317 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E397670Length: 504 bp (806 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E397670 [] (trimmed) GGGGAAACAAACTTTGCATCTTCCATTATTTGAATCACAGGAAGCTAACGGAAAAATTATATACAAGTTATTTGCTTCAACAATATTTGTGGGTA
TTTTGTTAATATGGTTATATCGATTAATTAATATGCCAAGTAAATGTGAATCTGGAAGATTATCATGGATATGTATGTTCTTAGCTGAGCTTTGC
TTTGGGTTTTATTGGATTATCACTCACTCCGTTCGTTGGAATGTTATACATACTTATCCTTATAAGAACAGACTTTCCCTCAGATATGAGGGTAA
TTTGCCAAAAGTAGACATATTTGTTTGTACAGCAGATCCCATAATGGAAGCCTCCAACAATGGCGATTAACACCATATTATCAGCCTTGTCATAT
AATTACCCTACTCAAAAGTTGAACGTATACCTTTCTGAATGATGGTGGTTCACAATATACATTTTATGCTCTACTTTGAACCCTCTCAATTCTCA
AAATATTGGATACCCTTTTGCCACAGATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397670] SGN-U572655 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198996 [Download][View] Facility Assigned ID: FA0AAD34BD05RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.948 Expected Error Rate: 0.0249 Quality Trim Threshold: 14.5