EST details — SGN-C185153

Search information 
Request: 185153Match: SGN-C185153
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C185153Clone name: TUS-46-K7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185153 is on microarray TOM1 spot ID 1-1-2.3.12.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24055 [cLED-7-B14] Trace: SGN-T50607 EST: SGN-E232098 Direction: 5' Facility: TIGR
Clone: SGN-C185153 [TUS-46-K7] Trace: SGN-T198944 EST: SGN-E397618 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E397619Length: 635 bp (872 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E397619 [] (trimmed) TGCCACAAGAAGTGCTGAAAGCGGAAGTGAAGGTTCATCAGACGAAAATGATGAAAATGATAACCATGAATTTTCTGCTGACAAAAATAGAAGCT
TTGATCTAATGCTTGCTAATGGAGCCAATGCTCAGACCAATCCTGCAACAGGGAATCCAGTCGCTATGCCCGCACCTAATCTGAATATTGGGATG
GATTTGTGGAACGCACCTTCTGGCGGTCCCGGAATGATCAAAATGCGATCAAATCAATCTGGTGTCTCGCCAGCTCCTGGGATGGGACGTGAATG
GATTCAGGATGAACGTGAACTTAAAAGGCAAAAGAGAAAGCAGTCTAATAGAGAATCAGCTCGGAGGTCGAGATTACGCAAGCAGGCTGAGTGTG
AAGAGCTACAACATAAGGTAGAGACATTGAGCAATGAGAATCATGGACTCAAAGAGGAGTTGCGAAAGGTCTCTGAGGAATGTGAGAAGCTTACC
TCGGAGAATAATTCAATAAAGGATGAGTTGACGAGGTTGTATGGGCCAGAGGCTGTGTCCAAGCTAGAGAGTAATGCCAACGCCATGCGTCTTCA
GTCCAATGTTGAGGGAGCTAAGAGTTGAGGACAAGCCATGACAGAGTAACTTATTTTGGTTAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E397619] SGN-U574397 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T198945 [Download][View] Facility Assigned ID: FA0AAD34AF04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5