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EST details — SGN-C185365

Search information 
Request: 185365Match: SGN-C185365
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C185365Clone name: TUS-47-D3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185365 is on microarray TOM1 spot ID 1-1-6.4.10.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C70044 [cLER-13-G20] Trace: SGN-T94596 EST: SGN-E283902 Direction: 5' Facility: TIGR
Clone: SGN-C185365 [TUS-47-D3] Trace: SGN-T192236 EST: SGN-E390910 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E390911Length: 708 bp (913 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390911 [] (trimmed) GTTTTGAGTACATTTAACCATGAAAGATTCAATGCAAGTGACTATTTTGTCCAAAAACCTCATTAAACCATCATTACCAACACCAAAACACCTTA
AATATCACAAGTTATCTTTCTTTGATCAAGTTGCTGATGTAGCACACTTGCCTCTTGTTCTTTTCTATCCTCATTGTAAGAACAACTCGAAACAT
GAAGAGCTTGAAGAATCCTTATCGAGGATTTTATCACATGTTTACCCTTTAGCTGGTCGATTTGCTGAAGATGATGAATCATTAATTCTTTGTCT
TGATCAAGGTGTTACTTATATCAAAGCAAAGGTCAATTGTACCCTTGATGATTTACTTCAACAAACAAAAAAAGACCTTGATCTAGCCTTGTCAT
TTTGGCCTCAAGGTACGATGGATGTTGATGACTCTAATTTGTTCGTCACGCCACTTATGGTTGTGCAAGTCACGACATTTGAATGTGGTGGTCTA
GCCCTAGCTATTAGCATTGCACATCCTGTTATGGACGGATGCACCACATTCAAAATCCTTTATGAATGGACCAAAGTGTGCAAATTTGGTACTCC
TTCTAAGGAAATCATCTTCATTGGAATTTCAATGTAGGTGCTCTTTTCCCTTAAAAGCACGATTTATCAACCCTCCTTGAGCCTCCGGTTGATGA
AGGCAAACCCAAAGACCCTAAATTAATTGGCAAGAATTTTGTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390911] SGN-U570129 Tomato 200607 Build 2 46 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192237 [Download][View] Facility Assigned ID: FA0AAD35CB02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5