EST details — SGN-C185869

Search information 
Request: 185869Match: SGN-C185869
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C185869Clone name: TUS-48-I3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185869 is on microarray TOM1 spot ID 1-1-6.1.7.6 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C363 [cLEB-3-D1] Trace: SGN-T23029 EST: SGN-E203283 Direction: 5' Facility: TIGR
Clone: SGN-C185869 [TUS-48-I3] Trace: SGN-T188176 EST: SGN-E376136 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E376137Length: 579 bp (898 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376137 [] (trimmed) AGGTACACTCTGTTTCATCCATGTCATTCATCAAACTCATGCATGTGATCCAACAGATAGTTTGCAGCCATCTCCTCATTTTGTTGCATGCAAAA
TATACTTGCAACACCAAAGCTCGATCGAAACCCATAGCTTCAAGTCGCTCAATAGCCTCACGCTCTTCAGGTGTGACGGTCACAGCTTGTGGTAT
AGCCCCTGCTGGCTGCCCAGGCACATTCCCTTCCCCCTCAACGGGTTCATTGATGAGGCGCAAGAAGTCAGCTTGATGCTCTTGAATCAGCCGCA
TCAATTGAGGATTTTGCTTACCCAACTCCTGGAGCATTGGCTGCAATATCTGTGGGTTTGCTTGCACCATTGCTCGGAGGGCTTGAAACTGTGGA
CTATTGCTTAAGAAATCCAAATTTCCAGCTCCAGCATTTGCACCCACATTTGGAAGGCCCTGAGGAAAGAGATCCAAAGGATTAGCATTTGGCCC
ACTGGACGGCTGTGAAGCCTGAACAGGGGGATTTACAGCCTGTCCGCTAGCAGGAGCAACAGGTGGGATTTCTGCTTGCTCAGGAATACCAGAGT
ACCTGCCCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376137] SGN-U569989 Tomato 200607 Build 2 45 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188177 [Download][View] Facility Assigned ID: FA0AAD36AE02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 0