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EST details — SGN-E200393

Search information 
Request: 200393Match: SGN-E200393
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C3213Clone name: cLEC-1-I1
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C3213 [cLEC-1-I1] Trace: SGN-T24607 EST: SGN-E200394 Direction: 3' Facility: TIGR
Clone: SGN-C186447 [TUS-50-A5] Trace: SGN-T351557 EST: SGN-E550682 Direction: 5' Facility: Giovanni
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Sequence 
Sequence Id: SGN-E200393Length: 302 bp (854 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E200393 [] (trimmed) ATATACTGCATTTTCTTGGGAAGCTTGAATAACTTATGGGCACTAAACAAGCAGTATGGTCTGTCAAAGGGTACCAATGAGGCCATGCTTGTGAG
TGAAGCATATCGTACCCTTCGTGACAGAGGTCCATTCCCAGCTCATGAGGTTCTCAAGGGACTTGAGGGTAGCTATGGCTTTGTGATCTATGATC
ATAAGGCTGGTAATGTCTTTGTTGCCCTTGGTGCTGATGAAACTGCAAAGATGTTCTGGGGAATAGCATCTGATGGATCTGTCATGATCTCTGAT
AATGTGGATCATATCAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E200393] SGN-U564627 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T24606 [Download][View] Facility Assigned ID: TCAAA49TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.954 Expected Error Rate: 0.0271 Quality Trim Threshold: 14.5