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EST details — SGN-E200590

Search information 
Request: 200590Match: SGN-E200590
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C14805Clone name: cLEC-9-C17
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C183584 is on microarray TOM1: SGN-S1-1-3.1.1.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183584 [TUS-42-I22] Trace: SGN-T196036 EST: SGN-E394710 Direction: 5' Facility: INRA
Clone: SGN-C183584 [TUS-42-I22] Trace: SGN-T196036 EST: SGN-E399283 Direction: 5' Facility: INRA
Clone: SGN-C183584 [TUS-42-I22] Trace: SGN-T196142 EST: SGN-E394816 Direction: 3' Facility: INRA
Clone: SGN-C183584 [TUS-42-I22] Trace: SGN-T200310 EST: SGN-E399282 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E200590Length: 421 bp (875 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E200590 [] (trimmed) CCGACGCAAAACAATCAGCGACCAAACAAGTAGCTGAGCAGAGAGATGGCTGCTCCGGCTGCCGAGGGTCTGGCTGTGACGGCGCTGCGGTCGGT
GCTCCACCGTGTCCGTCAGGCTGCTGAAAGGTCCGGTCGCCGTGCTGATGACGTGAGAGTGTTGGCCGTTAGCAAGACGAAGCCTATTTCTCTTA
TTACCCAAGTGTATGAAGCCGGTCACCGGTGTTTTGGTGAAAATTATGTTCAAGAGATTATCCAGAAGGCTCCTGAGCTTCCTGAGGACATAGAA
TGGCATTATATCGGGCATCTGCAGAGCAATAAAGCGAAGCAACTCTTAACTGCTGTTCCCAATCTAGCCATGGTTCACGGTGTTGATAACCAGAA
GCTTGCAAATTATCTTGATCGTGCGGTTTCAAGCATTGGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E200590] SGN-U565389 Tomato 200607 Build 2 40 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T24884 [Download][View] Facility Assigned ID: TCABG21TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.989 Expected Error Rate: 0.0126 Quality Trim Threshold: 14.5