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EST details — SGN-E201377

Search information 
Request: 201377Match: SGN-E201377
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C8030Clone name: cLEC-4-B15
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C183769 is on microarray TOM1: SGN-S1-1-2.1.19.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183769 [TUS-43-A15] Trace: SGN-T196174 EST: SGN-E394848 Direction: 3' Facility: INRA
Clone: SGN-C183769 [TUS-43-A15] Trace: SGN-T199679 EST: SGN-E398353 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E201377Length: 325 bp (528 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E201377 [] (trimmed) GGCACAAGGAGTGGCTGACTGAAGTTAATTACCTTGGCCAACTTCGTCATCCAAATTTGGTTAAACTCATTGGCTATTGCATCGACGGTGATAAC
CACCTTTTAGTGTATGAGTTCATGCCTAAAGGAAGCTTGGAGAACCATTTGTTTAGAAGAGGACCTCAACCTCTGAATTGGGCAACAAGAATTAA
GGTGGCTATTGGTGCTGCTAGAGGCCTTGCTTTCCTTCATGATGCTAAAGAACAGGTCATATATCGGGATTTCAAGGCTTCTAATATTCTGTTGG
ATGCGGAATTTAATTCAAAGCTGTCAGATTTTGGTTTGGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E201377] SGN-U582401 Tomato 200607 Build 2 43 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T24327 [Download][View] Facility Assigned ID: TCAAO08TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0186 Quality Trim Threshold: 14.5