EST details — SGN-E202193

Search information 
Request: 202193Match: SGN-E202193
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C14171Clone name: cLEC-7-B20
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C172865 is on microarray TOM1: SGN-S1-1-2.3.20.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172865 [TUS-14-K7] Trace: SGN-T195132 EST: SGN-E393806 Direction: 3' Facility: INRA
Clone: SGN-C172865 [TUS-14-K7] Trace: SGN-T195590 EST: SGN-E394264 Direction: 5' Facility: INRA
Clone: SGN-C172865 [TUS-14-K7] Trace: SGN-T195753 EST: SGN-E394427 Direction: 3' Facility: INRA
Clone: SGN-C172865 [TUS-14-K7] Trace: SGN-T195753 EST: SGN-E398959 Direction: 3' Facility: INRA
Clone: SGN-C172865 [TUS-14-K7] Trace: SGN-T200186 EST: SGN-E398960 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E202193Length: 462 bp (1011 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E202193 [] (trimmed) CAGCAGATATGGGTGTTGAGAACCTTCTAGTCGGTGCTATGGACACGAAGCTATTAGAGGCACTTTATTGGAAAGGAGTGCCAGCTTTTGATATG
GGTAGCCATATGAGCACTGTAGATGTTGGATGGGGTTCACCAACATTTCACAAAATGGGGAGAGAGAAAGTTGTACTCATAGATTCTATCTTACC
TTATGGCTTTGAACTCCTAATGTGTGATACCGATATGGTGTGGCTAAAGAACCCTCTTCCTTATATAGCACGTTTCCCTGAAGCAGATGTATTGA
CCTCCACCGATCAAGTTGTACCAACAGTTACCGATGACAGATTGGACCTGTGGCAACAAGTTGGCGCTGCTTATAATATTGGAATCTTCCATTGG
CGGGCTACTGAGTCCGCAAAGAAACTGGCCAGAGAATGGAAAGAAATGATTTTAGCTGACGACAAGATATGGGATCAGAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202193] SGN-U582794 Tomato 200607 Build 2 32 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T25475 [Download][View] Facility Assigned ID: TCABB10TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0179 Quality Trim Threshold: 14.5