EST details — SGN-E202337

Search information 
Request: 202337Match: SGN-E202337
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C10854Clone name: cLEC-6-H17
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C172723 is on microarray TOM1: SGN-S1-1-8.1.20.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172723 [TUS-14-E9] Trace: SGN-T195111 EST: SGN-E393785 Direction: 3' Facility: INRA
Clone: SGN-C172723 [TUS-14-E9] Trace: SGN-T195112 EST: SGN-E393786 Direction: 5' Facility: INRA
Clone: SGN-C172723 [TUS-14-E9] Trace: SGN-T195743 EST: SGN-E394417 Direction: 3' Facility: INRA
Clone: SGN-C172723 [TUS-14-E9] Trace: SGN-T195743 EST: SGN-E399519 Direction: 3' Facility: INRA
Clone: SGN-C172723 [TUS-14-E9] Trace: SGN-T200172 EST: SGN-E398921 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E202337Length: 561 bp (705 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E202337 [] (trimmed) GAAAGTGATATCGAAAATCTTCCTTATATGCAAGCTGTAATCAAAGAATCACTTCGTTTACATCCTCCTCTCCCTTTCTTGATCCCAAGAGAGAC
AATTCAAGACACTAAGTTCATGGGGTACGACGTGCTAAAAGGGACTCGAGTCCTCGTAAATGCCTGGGCAATTGGAAGAGATCCTGAATGTTGGG
ACGACCCTATGAGTTTCAAGCCCGAGAGGTTTCTTGGCTCGAAATTGGACGTGAAGGGTCAGCATTATGAGCTAATTCCATTTGGTGCAGGACGA
AGAATGTGTGTTGGTTTGCCTTTAGGCCATCGAATGATGCATTTCGCTCTTGGATCGTTGCTTCATGAATTCGATTGGGAGCTTCCAGATGGTGT
GTCTCCTAAATCTATTAATATGGATGAAAGCATGGGAGTAACAGCTAGAAAACGCGACTCTTTGAAAGTGATTCCAAAAAAGGTTTGACGACTTA
CTGGATAGTTATTACATATTATTTCATAATATATCGNTTTAATATATATAATGTTTCGATACATAACATTGTTGTCCCATTATCAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202337] SGN-U580161 Tomato 200607 Build 2 41 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T23998 [Download][View] Facility Assigned ID: TCAAW45TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0063 Quality Trim Threshold: 14.5