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EST details — SGN-E203801

Search information 
Request: 203801Match: SGN-E203801
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C2797Clone name: cLEC-17-D8
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C183527 is on microarray TOM1: SGN-S1-1-4.3.1.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C183527 [TUS-42-G13] Trace: SGN-T1766 EST: SGN-E378314 Direction: 5' Facility: Giov. Lab
Clone: SGN-C183527 [TUS-42-G13] Trace: SGN-T194933 EST: SGN-E393607 Direction: 5' Facility: INRA
Clone: SGN-C183527 [TUS-42-G13] Trace: SGN-T195486 EST: SGN-E394160 Direction: 3' Facility: INRA
Clone: SGN-C183527 [TUS-42-G13] Trace: SGN-T195487 EST: SGN-E394161 Direction: 5' Facility: INRA
Clone: SGN-C183527 [TUS-42-G13] Trace: SGN-T195487 EST: SGN-E399155 Direction: 5' Facility: INRA
Clone: SGN-C183527 [TUS-42-G13] Trace: SGN-T199643 EST: SGN-E398317 Direction: 3' Facility: INRA
Clone: SGN-C183527 [TUS-42-G13] Trace: SGN-T199643 EST: SGN-E399154 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E203801Length: 580 bp (858 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E203801 [] (trimmed) ATTCTTCAATGGCGACTAGTTTAATCCGACGAGCGATTTCTAGGGTTCAGTCATCAGCACCGGCGGCGAGGCTACTCGTCGCCAGAGCTCACGCT
TCCGACTCCCAAGCACAGAAGGTAGAATCTAAGCCTAATCTCAAATCATTTCAAATTTACCGATGGACTCCAGACAACCCAGGGAAACCTGAGCT
CAAAGAATACAAAATCGATCTGAAGGAATGCGGACCTATGGTTTTAGATGCGCTAATCAAAATCAAGAATGAAATTGACCCTACACTTACCTTCA
GGAGATCCTGTAGAGAAGGGATCTGTGGTTCATGTGCTATGAACATCGACGGATGTAATGGACTCGCTTGTTTGACCAAGATCTCGTCGGATTCT
GAATCGACGATTACGCCGTTGCCACATATGTTTGTCATTAAGGATCTGGTGGTGGATATGACTAATTTCTATAATCAGTACAAGTCTATTGAGCC
TTGGCTTAAGAGGAAGACACCTGCACCAACGCCTGGGAAGGAGATACCACAGAGCAAGAGCGATAGGGCTAAGTTGGATGGGATGTACGAATGTA
TTCTATGTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E203801] SGN-U563726 Tomato 200607 Build 2 70 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T27217 [Download][View] Facility Assigned ID: TCACP16TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.983 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5