EST details — SGN-E204015

Search information 
Request: 204015Match: SGN-E204015
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C3903Clone name: cLEC-22-M19
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C184064 is on microarray TOM1: SGN-S1-1-3.1.18.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184064 [TUS-43-M22] Trace: SGN-T1809 EST: SGN-E378729 Direction: 5' Facility: Giov. Lab
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Sequence 
Sequence Id: SGN-E204015Length: 242 bp (788 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E204015 [] (trimmed) GCGTGGTTGGCACTGGTTCATTTGGAGTTGCCTTTCACGCTAAGTGCTTGGAAACTGGTGAATCTGTTGCCATAAAGAACGTCTTACAGGATAGG
AGATACAAAAACAGGGAACTTCAGATTATGCGCACACTTGATCATCCTAATGTTGTTAAACTACGACACTGGTTCTATTCTACTACTGAGAAGAA
TGAAGGCTACCTTAACCTTGTCCTGGAATACGTGTCTGAAACTGTTTACCGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204015] SGN-U574092 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T28179 [Download][View] Facility Assigned ID: TCADG82TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0396 Quality Trim Threshold: 14.5