EST details — SGN-E204951

Search information 
Request: 204951Match: SGN-E204951
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C2676Clone name: cLEC-16-M15
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173482 is on microarray TOM1: SGN-S1-1-1.4.18.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173482 [TUS-16-D24] Trace: SGN-T196905 EST: SGN-E395579 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E204951Length: 410 bp (823 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E204951 [] (trimmed) CAAATCATCCTTACCTGTGACTACCCCGAAAGTGAAGATGTCATGGGCTGATATGGCTCAGGAGGATGAACTTCAAGCTGAGGAAGTGAGTGAGT
CAATTGCCTTGAGAAGTCAGGTGAATGGTGTGGCTGAAGAGGAAATTACTAATCCGGAGAGTAAGCAAAAAACAGAATTGTCAAGGGAGAAACGA
GAGTACATTAGATTCTGTAATGTGAAGAGGAAAAAGGATTTCATATGTTTGGAGAGGGTGAGGGGGAAAATTGTGAATATACTTGATGGATTGGA
GCTACATAAGGGTGTCTTTAGCGCCGCTGAGCAAATTAGAATAGTTAAATATGCGGAGAAGCTTGACCAGATGGGGAAGAATGGGGAACTGAAAG
AGAGGACTTATACTACACCAACAAAGTGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204951] SGN-U584838 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T26840 [Download][View] Facility Assigned ID: TCACI80TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.936 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5