EST details — SGN-C21480

Search information 
Request: 21480Match: SGN-C21480
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C21480Clone name: cLED-34-C5
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C182424 is on microarray TOM1: SGN-S1-1-3.1.8.19
This clone has been mapped as P72.
Additional sequencing 
Clone: SGN-C182424 [TUS-39-I14] Trace: SGN-T194884 EST: SGN-E393558 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E243387Length: 598 bp (829 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E243387 [] (trimmed) CCGAGGCCAATGCTCAGTATTACCAGCAAGAAGCCTCCAAACTGCGCGCACAAATTGGAAATCTGATGAACCAAAACAGGAACATGATGGGTGAA
GCTCTTGCTGGAATGAAACTCAAAGAACTGAAGAATCTGGAGCAAAGAATTGAAAAAGGGATTAGCAAAATCCGATCCAAAAAGAATGAGCTGTT
GTTTGCTGAAATTGAGTATATGCAGAAGAGGGAAGTTGATTTACACAACAACAATCAGTACCTGAGAGCAAAGATTGCTGAAACTGAGAGAGCTC
AGCATCAGCATCAGCAGATGAACTTGATGCCAGGGAGTTCATCAAACTATCATGAGCTTGTGCCTCCACCTCAGCAATTCGATACTCGAAACTAT
CTACAAGTTAATGGATTGCAAACCAACAACCATTACCCTAGACAAGACCAACCCCCTATTCAACTAGTCTAATGTGCTTGAGAGATTGTCTTCTT
TCTGATGTGATCTACATATAATCCACAAAAGAAGACTGCTATTAAGCTTGAAGATTAATGGAACTTAAGTATGTATACCATATTATTAATTACTT
GTTGCATGAGCTAAGACTCTTGAATATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E243387] SGN-U578526 Tomato 200607 Build 2 36 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T57161 [Download][View] Facility Assigned ID: TOVFC15TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0019 Quality Trim Threshold: 14.5