EST details — SGN-C2151

Search information 
Request: 2151Match: SGN-C2151
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C2151Clone name: cLEC-14-P4
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173370 is on microarray TOM1: SGN-S1-1-1.4.20.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173370 [TUS-15-P8] Trace: SGN-T188973 EST: SGN-E375359 Direction: 3' Facility: INRA
Clone: SGN-C173370 [TUS-15-P8] Trace: SGN-T188974 EST: SGN-E375360 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E204917Length: 309 bp (873 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E204917 [] (trimmed) CCAGGACTTAGCATATGTTCTAAAGTTATATGATTTCGATGATCATCATGAGATAAAGGAGAAATATTATTATTATCTATTAGTCCGTGACTCGT
ACATCTCGGACTAGGAGGTCTTTGTGGTATGACTAGACCAAGACTCATGGCCTTGGTTGATGTTTTTGGAGCTTGACCGCGGCCATAGAGTGGAA
TCAATGTTTTTTGTGAGACTTCAGCTTTGCAAACAGGGCATTTTGGCTGTTTGTTATCGATGTTTTCAGATGATAAGGCGTTATAATGTATTCAT
TTGTACATACAAGGCCAACCATAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E204917] SGN-U579610 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T26533 [Download][View] Facility Assigned ID: TCACD86TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.937 Expected Error Rate: 0.0266 Quality Trim Threshold: 14.5