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EST details — SGN-E226969

Search information 
Request: 226969Match: SGN-E226969
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C17577Clone name: cLED-1-E3
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C183972 is on microarray TOM1: SGN-S1-1-7.2.19.18
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C17577 [cLED-1-E3] Trace: SGN-T48482 EST: SGN-E226970 Direction: 3' Facility: TIGR
Clone: SGN-C183972 [TUS-43-J2] Trace: SGN-T197962 EST: SGN-E396636 Direction: 3' Facility: INRA
Clone: SGN-C183972 [TUS-43-J2] Trace: SGN-T197963 EST: SGN-E396637 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E226969Length: 505 bp (789 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E226969 [] (trimmed) TTCTAGCCGAGCGGGTGTCTCAGTCAACGGTTTTCCTACTCCATTTATCATCATGAAGCCATTAAGAGCAAGTATGCTTGCTGCATCACTCCAAC
GTGCCATGGGCGTTGGTAACAAGGGAAATTGTACAAATGGAGAGCTCTCTGGTATCTCTCTTTCCAAGCTCCTTCAGGGGAGAAAAATTTTGATT
GTGGACGACAACAACGTGAACCTTAGAGTAGCTGCTGCTGCACTGAAGAAGTATGGTGCTGATGTTATCTGCACAGACAGTGGAAAAAAAGCACT
CACTTTTTTACAACCACCTCATCAATTTGATGCCTGTTTCATGGATATTCAGATGCCAGAAATGGATGGGTTTCAGGCTACAAAAATAATCCGCG
AAATGGAATCTGATATCAATAGCCGTATCAAACTTGGGCAACTACCTCCTGAAGCATACGGAAATGTTTCAAGCTGGAAAGTGCCCATTCTGGCC
ATGACTGCTGACGTAATTCAAGCTACAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E226969] SGN-U574362 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T48481 [Download][View] Facility Assigned ID: TOVAA26TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0076 Quality Trim Threshold: 14.5