Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-C23024

Search information 
Request: 23024Match: SGN-C23024
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C23024Clone name: cLED-4-E23
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C174422 is on microarray TOM1: SGN-S1-1-5.4.16.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174422 [TUS-18-L4] Trace: SGN-T197356 EST: SGN-E396030 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E231619Length: 524 bp (893 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E231619 [] (trimmed) CTACCGTGGAAGCACCATCAGGAGAGGGGAGAACAGCATCTGCTGCGGCTGGAGCTGGAGTCCAAAATCCCTTTGATTTCTCAGCCATGTCTGGA
CTGCTCAATGACCCAAGTATCAAAGAACTAGCGGAGCAGATTGCAAAAGACCCTGCATTTAATCAGATGGCAGAGCAGCTTCAGAAGACCTTTCA
AGGTGCAGCAGTGGAAGAAAGTGTTCCCAACTTTGATAGCCAACAATACTACTCTACAATGCAACAGGTTATGCAAAATCCTCAGTTTATGACCA
TGGCTGAGCGGCTTGGTAATGCATTGATGCAGGATCCATCCATGTCTGGCATGCTTGAGAGTTTGTCAAACCCTGCTCAGAAGGAGCAACTTGAA
GAACGGATGGCGCGCATTAAAGAAGACCCATCACTCAAACCAATCTTGGAAGAGATAGAGAGCGGAGGACCAGCTGCAATGATGAGGTATTGGAA
CGATCAAGATGTTCTGAAGAAGATTGGTGAAGCAATGGGTTTTGCTGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E231619] SGN-U584412 Tomato 200607 Build 2 161 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T49388 [Download][View] Facility Assigned ID: TOVAM36TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0055 Quality Trim Threshold: 14.5