EST details — SGN-E230990

Search information 
Request: 230990Match: SGN-E230990
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C23289Clone name: cLED-5-A10
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C174606 is on microarray TOM1: SGN-S1-1-5.3.15.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174606 [TUS-19-C20] Trace: SGN-T189365 EST: SGN-E376751 Direction: 3' Facility: INRA
Clone: SGN-C174606 [TUS-19-C20] Trace: SGN-T189366 EST: SGN-E376752 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E230990Length: 329 bp (434 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E230990 [] (trimmed) TCCGATGGGAGTGCTCTCCATCCAACTCTACCAATTTTAAAATATGAAAGTAACGGTCTCGTGTCTCTTTCCCCCAAGGACTCTTATGCATCAAA
TCAGGTACAGTCCATGGAGGGTTCTCCTGATCCTTCTTTTCAGGTGGCTGCTATGACAAGAAAGGAGAAGGTGGAGAAGTTATTCCATCCGTCAG
GAGTTAAGATTGAAAATAAACGTGATTTTGAAGGGGTTGGCATAAGAGCTCCCACAGAATTAGGATCCTCAGTTGTACAGGAGTGTTCTTCTATA
AATTCTGGCTTGGATGAAATTTCAGAAGAAGCAGCTTAGTTTTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E230990] SGN-U574041 Tomato 200607 Build 2 66 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T49606 [Download][View] Facility Assigned ID: TOVAR05TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0009 Quality Trim Threshold: 14.5