EST details — SGN-C23120

Search information 
Request: 23120Match: SGN-C23120
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C23120Clone name: cLED-4-I4
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C174493 is on microarray TOM1: SGN-S1-1-6.3.16.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174493 [TUS-18-O3] Trace: SGN-T1314 EST: SGN-E378248 Direction: 5' Facility: Giov. Lab
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Sequence 
Sequence Id: SGN-E231481Length: 430 bp (1393 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E231481 [] (trimmed) AGTTGATGTACTTGCTGAGGAGGTAATAATTCAGAAAAGAAAAAACGATTTTTCTTCCCAAAATGACGTTTTGTCTAGGTTCATGAGGAATATTG
ATGATGATAAACTCCTTAGGGACATTATCGTCAGTTTTCTATTGGCGGGTAGAGACACTGTTGCGTCCGGACTGACTACTTTTTTTTGGCTACTA
GCTCAACATCCACATGTTATTAATGAAATTCGAGCTGAGTCGAATCGAGTAATGGGAAAAACAGTAAATGGAACTCTAGCTACTTTCGAAGGAAT
TCGGGAAATGCATTTTTTGACTGCAGCTATACATGAGAGTATTAGGCTATTTCCGCCTGTTCAATTTGATTCCAAGTTTTGTCAAGAAGACGATA
CGCTCCCTGATGGTACGTTCGTGGCTAAAGGGACGAGGGTGACGTATCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E231481] SGN-U567361 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T49250 [Download][View] Facility Assigned ID: TOVAN50TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0060 Quality Trim Threshold: 14.5