EST details — SGN-C23164

Search information 
Request: 23164Match: SGN-C23164
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C23164Clone name: cLED-4-K23
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C174522 is on microarray TOM1: SGN-S1-1-1.4.16.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174522 [TUS-18-P8] Trace: SGN-T197389 EST: SGN-E396063 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E231640Length: 535 bp (896 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E231640 [] (trimmed) GCCATATGGCCCATGTCTATGATTTTTACAAGCCCATACTCGACAGTGAATATCCAGTGGTTGATGGCAAACTTTCACAAACTTGTTATCTTATG
GCACTTGACTCTTGCTACAAGAGCTTATGCAACAAATACGAAAAATTGGAGGGCAAGCAGTTTTCAATTGATGATGCAGCCTATTTTGTTTTCCA
TTCACCATACAACAAGCTTGTACAGAAGAGCACTGCTCGGTTGATGTTCAATGACTTTACAAGGAACGCTAGTTCCATTGATGAGTCTACTAAAG
AAAAGTTGGCACCATTTTCATCCCTAACTGGTGATGAGAGTTATCAAAGCCGTGATCTTGAGAAGACATCCTGGCAAGTAGCAAAACCATTTTAT
GACGAGAAGGTAAAACCGGCCACATTAATACCAAAACAAGTTGGCAACATGTACACCGCGTCTCTCTATGCTGCTTTTGCATCCCTCCTTCACAA
TAAGCACAGCTCATTGGCTGGACAGAGGGTAGTATTGTTCTCTTACGGGAGTGGATTGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E231640] SGN-U579858 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T49409 [Download][View] Facility Assigned ID: TOVAM72TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0010 Quality Trim Threshold: 14.5