EST details — SGN-E231939
| Search information |
| Request: 231939 | Match: SGN-E231939 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C24282 | Clone name: cLED-7-L22 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C175320 is on microarray TOM1: SGN-S1-1-3.1.13.14
See unigene SGN-U578039 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C175320 [TUS-21-A14] | Trace: SGN-T190374 | EST: SGN-E377324 | Direction: 3' | Facility: INRA |
| Clone: SGN-C175320 [TUS-21-A14] | Trace: SGN-T190375 | EST: SGN-E377325 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E231939 | Length: 512 bp (801 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E231939 [] (trimmed)
CAGCTTATGCATACTCATTTTCTTCACTCAATTTTTTAACTCTTTTTTTTTTCTTGGATAATGGCACTGACCCTTCTTCATTCTCCCCTTAATTA
TCACATAAAAATTTTCCAAATTTCAAGATTCAATCAAAAAACCCCATTTCCCACTGCTTAAACAAACCCCACATAGTTTTTTTGCTTTCACAATT
CTTGCACCTTAGAGAACTTAAGGGTTGAAAGTAAAATAAATATGGAAGTTGGAAGGGTTATTAATGAAAAACTTTCTCATTGTCTCTGGATGTCC
AAATCTTCCCCATCTTTTCATGGTTCTGTATCAATGGTTAATTTCGAAGATGTTGGTCGAGGAGAAGTGTCTAAAGAGAGGTCATTTTTCCCAGG
AATTGACAAAGAAGAAACTAGCAATGATGATTATGATAGCTGTTATCATCAGCCAGAGAAGAAGAGAACACTTTTGCCTAATCAAGTTCAGTTTC
TTGAGAAGAGTTTTGAGGTACATAACAAGCTTGAACC
TCACATAAAAATTTTCCAAATTTCAAGATTCAATCAAAAAACCCCATTTCCCACTGCTTAAACAAACCCCACATAGTTTTTTTGCTTTCACAATT
CTTGCACCTTAGAGAACTTAAGGGTTGAAAGTAAAATAAATATGGAAGTTGGAAGGGTTATTAATGAAAAACTTTCTCATTGTCTCTGGATGTCC
AAATCTTCCCCATCTTTTCATGGTTCTGTATCAATGGTTAATTTCGAAGATGTTGGTCGAGGAGAAGTGTCTAAAGAGAGGTCATTTTTCCCAGG
AATTGACAAAGAAGAAACTAGCAATGATGATTATGATAGCTGTTATCATCAGCCAGAGAAGAAGAGAACACTTTTGCCTAATCAAGTTCAGTTTC
TTGAGAAGAGTTTTGAGGTACATAACAAGCTTGAACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E231939] | SGN-U578039 | Tomato 200607 | Build 2 | 54 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T50448 [Download][View] | Facility Assigned ID: TOVBB71TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.928 | Expected Error Rate: 0.0150 | Quality Trim Threshold: 14.5 |
Working
