EST details — SGN-E232009

Search information 
Request: 232009Match: SGN-E232009
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C24174Clone name: cLED-7-G4
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175251 is on microarray TOM1: SGN-S1-1-8.2.13.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175251 [TUS-20-N17] Trace: SGN-T190007 EST: SGN-E377508 Direction: 3' Facility: INRA
Clone: SGN-C175251 [TUS-20-N17] Trace: SGN-T190008 EST: SGN-E377509 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E232009Length: 626 bp (777 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E232009 [] (trimmed) CTTCGCGAGGAGGGTCCACGAGCTTTGTACAAAGGATGGACTCCTTCTGTCATAGGAGTTATTCCATATGTGGGGCTTAATTTTGCTGTATATGA
ATCTTTAAAAGACTGGTTGGTCAAAACAAAACCATTTGGTCTTGTTGATAATTCTGAGCTTGGGGTTGTTACAAGGCTGGCATGTGGAGCTGCTG
CAGGAACAGTTGGACAAACGGTTGCCTACCCTCTTGATGTTATTCGTAGAAGGATGCAGATGGTGGGATGGAGTCATGCTGCATCTATTGTTACT
GGTGATGGGAGGAGCAAGGCTCCTCTCGAATATACTGGAATGATTGATGCTTTCAGGAAAACTGTGAAGTATGAGGGTGTCAGAGCCTTGTACAA
GGGTTTAGTGCCCAATTCAGTGAAGGTTGTTCCTTCAATATCTATTGCTTTCGTGGCGTATGAGCAAGTGAAGGACCTACTGGGAGTTGAGATCA
GAATTTCTGACTAATGAAAGAGAAGCTCCAGTATTTTTCTCATTCTTATGATAATTNTGTAGGCAAGGATACAAAGGGTTATAAATAACATGGTG
GTTACATAGTCTAGACGGCGAAATTTAGAGTCCTGTTCCTAGCCTGTGTTTAGAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E232009] SGN-U568441 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T50518 [Download][View] Facility Assigned ID: TOVAZ38TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0084 Quality Trim Threshold: 14.5