EST details — SGN-C23241

Search information 
Request: 23241Match: SGN-C23241
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C23241Clone name: cLED-4-N8
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C174573 is on microarray TOM1: SGN-S1-1-6.2.15.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174573 [TUS-19-B11] Trace: SGN-T189409 EST: SGN-E376795 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E231773Length: 419 bp (818 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E231773 [] (trimmed) CAGAAGACGAAGATCAAGCTAGGCAATCTTGAATTCGGAACTTCCCCCATCTAAAGATGCTTCCCCTCTCTTTGCTCAAGACTGCACAGGGGCAT
CCCATGCTGGTGGAACTAAAAAATGGAGAGACTTATAATGGTCATTTGGTGAATTGTGATACTTGGATGAATATCCATCTTCGTGAAGTTATCTG
TACGTCAAAGGATGGAGATAGATTTTGGAGAATGCCTGAATGTTATATTCGTGGCAATACCATAAAGTATCTTAGAGTTCCTGACGAGGGTATTG
ATAAAGTTCAAGAAGAAACAAAAAGCCGTGGAGATAGAAAACCACCTGGTGTAGGTGGACGAGGAAGGGGAAGAGGAGGTTTGGATGAAGGTGGA
GCTGCTGGAAGACAGGGGAAAGGCTTCGTGCGTGGAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E231773] SGN-U577714 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T49542 [Download][View] Facility Assigned ID: TOVAP76TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0105 Quality Trim Threshold: 14.5