EST details — SGN-E232829
| Search information |
| Request: 232829 | Match: SGN-E232829 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C24473 | Clone name: cLED-8-G3 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C184255 is on microarray TOM1: SGN-S1-1-4.1.16.10
This clone has been mapped as cLED-8-G3.
| Additional sequencing |
| Clone: SGN-C184255 [TUS-44-E21] | Trace: SGN-T191879 | EST: SGN-E390553 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184255 [TUS-44-E21] | Trace: SGN-T197631 | EST: SGN-E396305 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E232829 | Length: 508 bp (1051 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E232829 [] (trimmed)
CTTATTTCCTCTTTCATCTACTTATGCATACTCATTTTCTTCACTCAATTTTTTAACTCTTTTTTTTTTCTTGGATAATGGCACTGACCCTTCTT
CATTCTCCCCTTAATTATCACATAAAAATTTTCCAAATTTCAAGATTCAATCAAAAAACCCCATTTCCCACTGCTTAAACAAACCCCACATAGTT
TTTTTGTTTTCACAATTCTTGCACCTTAGAGAACTTAAGGGTTGAAAGTAAAATAAATATGGAAGTTGGAAGGGTTATTAATGAAAAACTTTCTC
ATTGTCTCTGGATGTCCAATTCTTCCCCATCTTTTCATGGTTCTGTATCAATGGTTAATTTCGAAGATGTTGGTCGAGGAGAAGTGTCTAAAGAG
AGGTCATTTTTCCCAGGAATTGACAAAGAAGAAACTAGCAATGATGATTATGATAGCTGTTATCATCAGCCAGAGAAGAAGAGAAGACTTTTGCC
TAATCAAGTTCATTTTCTTGAGAAGAGTTTTGA
CATTCTCCCCTTAATTATCACATAAAAATTTTCCAAATTTCAAGATTCAATCAAAAAACCCCATTTCCCACTGCTTAAACAAACCCCACATAGTT
TTTTTGTTTTCACAATTCTTGCACCTTAGAGAACTTAAGGGTTGAAAGTAAAATAAATATGGAAGTTGGAAGGGTTATTAATGAAAAACTTTCTC
ATTGTCTCTGGATGTCCAATTCTTCCCCATCTTTTCATGGTTCTGTATCAATGGTTAATTTCGAAGATGTTGGTCGAGGAGAAGTGTCTAAAGAG
AGGTCATTTTTCCCAGGAATTGACAAAGAAGAAACTAGCAATGATGATTATGATAGCTGTTATCATCAGCCAGAGAAGAAGAGAAGACTTTTGCC
TAATCAAGTTCATTTTCTTGAGAAGAGTTTTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E232829] | SGN-U578039 | Tomato 200607 | Build 2 | 54 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T50762 [Download][View] | Facility Assigned ID: TOVBC38TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.925 | Expected Error Rate: 0.0101 | Quality Trim Threshold: 14.5 |
Working
