EST details — SGN-E235439
| Search information |
| Request: 235439 | Match: SGN-E235439 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C15223 | Clone name: cLED-11-E7 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C175419 is on microarray TOM1: SGN-S1-1-8.1.13.19
See unigene SGN-U575339 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C175419 [TUS-21-E17] | Trace: SGN-T190325 | EST: SGN-E377134 | Direction: 3' | Facility: INRA |
| Clone: SGN-C175419 [TUS-21-E17] | Trace: SGN-T190326 | EST: SGN-E377135 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E235439 | Length: 580 bp (903 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E235439 [] (trimmed)
CAGATGAGAAGAAAATGAGGGATATAAAGGATGAGTATGAGGATATGTCAGGGATCACAAATGTTGTGGGATCAATGTATACAACTCATATACCT
ATAATTGCTCCGAAAATTAGCGTTGCAGCTTATTTCAATAAGAGGCATACAGAGAGGAATCAGAAGACTTCGTATTCGATTACAGTTCAAGGGGT
TGTTGATCCAAGAGGGGTGTTTACTGATGTGTGTATCGGTTGGCCTGGTTCGATGCCTGATGATCAGGTACTGGAGAAATCCGCCCTTTTCCAGA
GGGCGAATACAGGGTTACTGAACAACGTTTGGATTGTTGGTAGTTCTGGATACCCTTTAATGGATTGGGTTTTAGTGCCTTATACACAGCAGCAG
CTAACTTGGACTCAACATGCTTTCAATGAGAAGATTGGTGAGGTTCAACGGGTGGCAAAGGAGGCGTTTGTAAGGTTGAAAAGGAGATGGTCTTG
TTTGCAGAAAAGAACAGAGGTGAAACTACAAGATTTGCCAGTGGTGCTAGGGGCGTGCTGCGTCTTGCATAATATTTGCCATATGAGGAATGAGG
AGATGGATCC
ATAATTGCTCCGAAAATTAGCGTTGCAGCTTATTTCAATAAGAGGCATACAGAGAGGAATCAGAAGACTTCGTATTCGATTACAGTTCAAGGGGT
TGTTGATCCAAGAGGGGTGTTTACTGATGTGTGTATCGGTTGGCCTGGTTCGATGCCTGATGATCAGGTACTGGAGAAATCCGCCCTTTTCCAGA
GGGCGAATACAGGGTTACTGAACAACGTTTGGATTGTTGGTAGTTCTGGATACCCTTTAATGGATTGGGTTTTAGTGCCTTATACACAGCAGCAG
CTAACTTGGACTCAACATGCTTTCAATGAGAAGATTGGTGAGGTTCAACGGGTGGCAAAGGAGGCGTTTGTAAGGTTGAAAAGGAGATGGTCTTG
TTTGCAGAAAAGAACAGAGGTGAAACTACAAGATTTGCCAGTGGTGCTAGGGGCGTGCTGCGTCTTGCATAATATTTGCCATATGAGGAATGAGG
AGATGGATCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E235439] | SGN-U575339 | Tomato 200607 | Build 2 | 29 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T51449 [Download][View] | Facility Assigned ID: TOVBO28TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 14.5 |
Working
