EST details — SGN-E235895

Search information 
Request: 235895Match: SGN-E235895
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16364Clone name: cLED-16-E14
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C185889 is on microarray TOM1: SGN-S1-1-2.1.7.14
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185889 [TUS-48-I23] Trace: SGN-T188267 EST: SGN-E376227 Direction: 3' Facility: INRA
Clone: SGN-C185889 [TUS-48-I23] Trace: SGN-T188268 EST: SGN-E376228 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E235895Length: 479 bp (789 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E235895 [] (trimmed) CAGCTTCAAACAAGTCAAATTACAATCTTTTTAGCAATGATGGCTGGAAAATTGCTGACCCATCTGCTCTCACGGCGGCGAACGGCGGTGCTGCT
GCCGGAAATGGGGTACTTGGGGTTGGTTTAAATGGCGGATTCAACAAAGGGGTTTACTCAAATCAAGCTTTGAACTTCAGTTATAATAAGGGTAC
TAATAATGTTGCAGTAGGTACAAAGGGGATAAACAAGAAATTTGGTAAAGGTTTTTTTGAAGATGAGCAGAAAAGTGTGAAGAAGAACAACAAGA
GTGTTAAAGAGAGTAACAAGGATGTTAATAGTGAGAAACAGAATGGTGTTGATAAAAGGTTTAAGACTTTGCCTCCAGCAGAATCTTTGCCAAGA
AATGAGACAGTTGGTGGATATATTTTTGTTTGCAACAATGATACCATGGCTGAGAATCTCAAAAGGGAGCTCTTTGGCTTGCCACCACGTTACAA
GGAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E235895] SGN-U578450 Tomato 200607 Build 2 55 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T52468 [Download][View] Facility Assigned ID: TOVCJ31TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0077 Quality Trim Threshold: 14.5