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EST details — SGN-E236417

Search information 
Request: 236417Match: SGN-E236417
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C15499Clone name: cLED-13-B3
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175568 is on microarray TOM1: SGN-S1-1-3.3.13.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175568 [TUS-21-K22] Trace: SGN-T190414 EST: SGN-E377364 Direction: 3' Facility: INRA
Clone: SGN-C175568 [TUS-21-K22] Trace: SGN-T190415 EST: SGN-E377365 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E236417Length: 399 bp (993 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E236417 [] (trimmed) GCACCAGGGCTCCTCTCTTCACCTTCCAATTTGTTCGAAAGCAGTCAGATACAGTTTACAAAATGGTTCAAGAGGCGACTAATGGTGGTTCCGAG
AAGTCACAGTTGGCTATCACTGTAGAACAGCTCATTGCCGTTAACCCTTACAATCCAGATATCCTCCCTGATCTTGAAAACTATGTCAACGAACA
GGTTTTGTCTCAAACATACAATCTGGATGCAAACCTTTGCCTGCTCCGTCTTTATCAGTTTGAGCCGGACAGAATGAGTACACCAATTGTTGCTC
GTATTTTGGTTAAGGCCTTAATGGCAATGCCAGCTCCAGATTACAGCCTGTGTCTCTTCCTAATCCCCGAACGAGTGCAAATTGAAGAGCAATTC
AAGACACTAAATGTTCTGT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E236417] SGN-U584733 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51695 [Download][View] Facility Assigned ID: TOVBY02TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0162 Quality Trim Threshold: 14.5