EST details — SGN-E236624

Search information 
Request: 236624Match: SGN-E236624
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C15543Clone name: cLED-13-D6
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175589 is on microarray TOM1: SGN-S1-1-6.4.13.20
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175589 [TUS-21-L19] Trace: SGN-T190550 EST: SGN-E377788 Direction: 3' Facility: INRA
Clone: SGN-C175589 [TUS-21-L19] Trace: SGN-T190551 EST: SGN-E377789 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E236624Length: 340 bp (888 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E236624 [] (trimmed) ACCAAATGAAACAATGCATAAAAATGATCTTTGCATAATTAATGCAAGTATTACTAATACATTCTATTTAACATTATTCTTTATACACCCTACCA
AGCTACCCCTTATAGGTTATGCGAGAATGTGTGCATTATTGTATGTGGAATATGAATGTGGTTATTACATAACACATGGATTAAAATGCTAAAAT
GACCAAACTAACCCTCATCGTAGTAAAAAAGTTTTATGTTGTTTAAAAGTAAACAAATAGTCTAAATTATATATTATATACTGATGTCTAATACA
TCAAACTAAATATTCAGAAGATATAACTCATCCTTGCATAACTTGTCTTTTACCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E236624] SGN-U566871 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51902 [Download][View] Facility Assigned ID: TOVBZ15TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.919 Expected Error Rate: 0.0197 Quality Trim Threshold: 14.5