EST details — SGN-E237643

Search information 
Request: 237643Match: SGN-E237643
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C17518Clone name: cLED-19-O9
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175965 is on microarray TOM1: SGN-S1-1-6.4.11.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175965 [TUS-22-L11] Trace: SGN-T180782 EST: SGN-E368033 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E237643Length: 452 bp (838 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E237643 [] (trimmed) AAATTAAGATTTTTTTTTCAAAAAAAAAAAAAACATATGGGGAAAGCACGTATAATAGGAATTGGAATGGATTATTCAGCAACAAGCAAAATAGC
TCTAAAATGGGCAATTGATAATTTAATTGAAGAAGGTGACACAATTATTATTATTCATGTTGTTTCTTCTAAAGTTGAACCAACTAGTAAACAAC
TCTTTGAAGATACTGGATCACCTTTGATACCTTTGGATGAATTTAAACAGATTAATGTGTCTAAGTACTATGGATTAAATCCTGACAAAGAGGTT
ATTGATATGCTTGAGCCTGTTGCCAAACTCAAAAAGGTGACAGTGGTGTCAAAGGTGTATTGGGGAGATGCAAGAGAGAAACTGTGTGATGCTGC
TGAAAGTCTCAAACTTGATTCACTTGTAATTGGAGGCAGAGGCTTAGGAGTTCTTAAAAGGGTGTTACTTGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E237643] SGN-U579266 Tomato 200607 Build 2 55 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T53557 [Download][View] Facility Assigned ID: TOVCU89TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.923 Expected Error Rate: 0.0075 Quality Trim Threshold: 14.5