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EST details — SGN-E237824

Search information 
Request: 237824Match: SGN-E237824
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C16944Clone name: cLED-18-B17
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C182236 is on microarray TOM1: SGN-S1-1-7.1.8.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C182236 [TUS-39-A18] Trace: SGN-T194836 EST: SGN-E393510 Direction: 3' Facility: INRA
Clone: SGN-C182236 [TUS-39-A18] Trace: SGN-T194836 EST: SGN-E399500 Direction: 3' Facility: INRA
Clone: SGN-C182236 [TUS-39-A18] Trace: SGN-T194837 EST: SGN-E393511 Direction: 3' Facility: INRA
Clone: SGN-C182236 [TUS-39-A18] Trace: SGN-T194838 EST: SGN-E393512 Direction: 5' Facility: INRA
Clone: SGN-C182236 [TUS-39-A18] Trace: SGN-T194838 EST: SGN-E398807 Direction: 5' Facility: INRA
Clone: SGN-C182236 [TUS-39-A18] Trace: SGN-T199389 EST: SGN-E398063 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E237824Length: 598 bp (850 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E237824 [] (trimmed) CAGATTATTTTCCTCTTACATAGAATCAAATTCCCCTACATCAACCCCACTTTATCATACTTCTCTTAGCTTATAATTTATTTTTTTTATAAAAC
CTTTGTTCTTCTCCTCCACAAATATTCATATATATTAACTTTTTTTTTTAAAAAAAAATGGTTGGTAAAAATAATTCCAATCACCTCCCTCCTGG
ATTTAGGTTTCATCCAACAGATGAGGAATTAATCATGTATTATCTTCGAAATCAAGCTACCTCCAAGCCTTGTCCATCTTCAATCATCCCCGAAG
TTGATGTCTATAAGTTCGATCCCTGGGAATTGCCTGAAAAAACTGAATTTGGAGAAAAAGAATGGTATTTCTTCACCCCACGTGATAGAAAATAT
CCAAATGGTGTTAGGCCAAATAGGGCAGCTGTGTCTGGTTATTGGAAAGCCACAGGCACAGATAAAGATTGAGTGAATCAAGGACTCAACCAACT
AGGCCAAATGGATCCATGAGGTTGGATGATTGGGTACTTTGTAGAATTTATAAGAAGAAGAATTTGGAAAGAGCTATAGAGATGATGAAAGTTGA
AGAAGACACACAAGAACCTCAAATAATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E237824] SGN-U566038 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T53127 [Download][View] Facility Assigned ID: TOVCS09TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.940 Expected Error Rate: 0.0076 Quality Trim Threshold: 14.5