EST details — SGN-C23859

Search information 
Request: 23859Match: SGN-C23859
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C23859Clone name: cLED-6-I23
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175017 is on microarray TOM1: SGN-S1-1-2.4.13.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175017 [TUS-20-D23] Trace: SGN-T190043 EST: SGN-E377544 Direction: 3' Facility: INRA
Clone: SGN-C175017 [TUS-20-D23] Trace: SGN-T190044 EST: SGN-E377545 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E233041Length: 414 bp (518 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E233041 [] (trimmed) CGCTTAATATCTCACGAGTGTTATGGAATCGATCTCCTGGAAGACTTCTTCAACTCAAAAAGGGTTCCAACAACAGATCTAGGAGCTTGTAGCCT
CAACCCGACAATCTTCGTTAAGAATCAGCCTTGTTGATAATTCCTCTTGAATCTTTTCTTCTACGCAGAATGAGCTCCAAAGAACTGATACCACT
GTGAAGAGGTCCATCTCCAAGAGTACATGTCATCTTCCAATGGTTGATACGACCTCAGCTAAGAGACGCTTGACTTCGAATTTAAAGGAATGGTA
GTGTTCCTTGGAATCAGGACGGTCATAAGTCCTCTGGCAGTTTCGAGTCCTACAGATAAAGAGGTGATATCCAAAAGGCGCAAATCTTTAACCTT
TTCATTACCCTCTCCACTAAGAATGGCTGCTTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E233041] SGN-U578971 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T50027 [Download][View] Facility Assigned ID: TOVAU60TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5